We have a Cisco 2821 router with two gig Ethernet ports. One of these ports connects to our LAN and the other port connects to the internet. NetFlow monitors both those ports and it works fine.
We added a 4 port 100 meg Ethernet card into that router. Cisco treats those ports as layer 2 devices so to set an IP address on those ports you have to create a VLAN. I can't seem to get NetFlow to monitor either the Ethernet interface or the VLAN. Is this possible?