The Publishing verification Wizard shows this error:
The server has the required certs for publishing. There is a version mismatch between the WSUS server version 3.2.7600.226 and the EminentWare server WSUS API version: 3.1.6001.65.
How can I update the API to match the WSUS server version?
On the EminentWare server, the WSUS Console only install exists. It is version 3.1.xxxx, which is WSUS 3.0 SP1.
You can simply download/grab WSUS 3.0 SP2 and run the install on the EminentWare server.
This will update the API to the same version.
I would shutdown the EW console and EW Service before running the WSUS upgrade just to make sure everything is unloaded/loaded properly.