There is not a built in software manager in Help Desk that I am aware of. You could create a part in Web Help Desk with the information about the software and add the amount of inventory/licenses you have for that product.
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Yes you can.
Create your software as a child asset. You can even set an Install count. Then for each computer the software is installed on, make the software a child asset of the computer. Is a little clunky to do but as long as you don't change it often it works well enough.